Scientific software

Software

Purpose-built assessment models, spatial tools, and statistical software for transparent, reproducible fisheries science.

Built for real analyses and real decisions

These tools grow out of active stock assessments, management strategy evaluation, mapping, and statistical diagnostics. Each package is designed to make complex quantitative work more transparent, repeatable, and useful.

Select any hex sticker to open the package website, including documentation, examples, and function references.

Population models

SBT package hex sticker featuring a painted southern bluefin tuna

Bespoke stock assessment

sbt

An age-structured southern bluefin tuna assessment model developed for CCSBT in RTMB, supporting frequentist and Bayesian inference, simulation, and projections.

Open package website
Decamod package hex sticker featuring a New Zealand rock lobster

Rock lobster assessment

decamod

A length-structured RTMB operating model for New Zealand rock lobster stock assessments, with maximum-likelihood and Bayesian inference.

Open package website
opal package hex sticker formed from waves and fish

General population assessment

opal

The open population assessment library: a modular RTMB framework for transparent, reproducible fisheries stock assessment.

Open package website

The southern bluefin tuna featured in the sbt sticker was painted by Joanne Webber Artist.

Mapping & diagnostics

nzsf package hex sticker with a map of New Zealand

Spatial science

nzsf

New Zealand Spatial Features provides a straightforward, layered approach to producing scientific maps in New Zealand waters.

Open package website
influ2 package hex sticker featuring an influence bubble plot

Bayesian diagnostics

influ2

Influence metrics and diagnostic plots for Bayesian models fitted with brms, including CDI, step, bubble, and comparison plots.

Open package website

See the assessments, reports, and research.

View publications