Plot LF — plot_lf • sbt

Plot length frequency (LF) fit.

Usage

plot_lf(
  data,
  object,
  posterior = NULL,
  probs = c(0.025, 0.975),
  years = NULL,
  fishery = "LL1",
  ...
)

data: A list containing the data that was passed to MakeADFun.
object: A list specifying the AD object created using MakeADFun.
posterior: An rstan object created using the tmbstan function for Bayesian inference. Default is NULL.
probs: A numeric vector of length 2 with probabilities in [0,1] for plotting quantiles of the posterior distribution. Default is c(0.025, 0.975).
years: A numeric vector of years to plot. If NULL (default), all years are plotted.
fishery: A character string specifying the fishery to plot. Options are "LL1", "LL2", "LL3", or "LL4". Default is "LL1".
...: Additional parameters passed on to facet_wrap.

A ggplot2 object displaying observed and predicted length frequencies by year.