Summarise biological feasibility of one model report — summarise_biological

Checks natural mortality, raw and continued harvest, abundance, recruitment, spawning biomass, catch accounting, and harvest penalties for one MLE or posterior draw. Raw harvest is checked before the positive numerical continuation. Natural mortality and its four estimated control points must be finite and positive at every accepted state.

Usage

summarise_biological_state(
  report,
  data,
  contract = biological_state_contract()
)

Arguments

report: A report list returned by the fitted RTMB object.
data: The corresponding SBT model data list.
contract: A list returned by biological_state_contract().

Value

An sbt_biological_state list containing one summary row and a table of every failed state-cell check.