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Plot CPUE LF

Source: R/plots.R
plot_cpue_lf.Rd

Plot length frequency fit from CPUE data.

Usage

plot_cpue_lf(
  data,
  object,
  posterior = NULL,
  probs = c(0.025, 0.975),
  years = NULL
)

Arguments

data

A list containing the data that was passed to MakeADFun.

object

A list specifying the AD object created using MakeADFun.

posterior

An rstan object created using the tmbstan function for Bayesian inference. Default is NULL.

probs

A numeric vector of length 2 with probabilities in [0,1] for plotting quantiles of the posterior distribution. Default is c(0.025, 0.975).

years

A numeric vector of years to plot. If NULL (default), all years are plotted.

Value

A ggplot2 object displaying observed and predicted CPUE length frequencies by year.